Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB4AP20338 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB4AP20338 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAB4AP20338 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
RAB4AP20338 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 AL136379.1-201ENST00000623471 2642 ntBASIC14.4□□□□□ -0.1
RAB4AP20338 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB4AP20338 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.4□□□□□ -0.1
RAB4AP20338 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB4AP20338 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB4AP20338 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB4AP20338 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB4AP20338 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB4AP20338 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB4AP20338 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB4AP20338 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.4□□□□□ -0.11
RAB4AP20338 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB4AP20338 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB4AP20338 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAB4AP20338 MIR572-201ENST00000384983 95 ntBASIC14.39□□□□□ -0.11
RAB4AP20338 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB4AP20338 AC008764.7-201ENST00000593779 1081 ntBASIC14.39□□□□□ -0.11
RAB4AP20338 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 AL035685.1-201ENST00000636663 812 ntBASIC14.39□□□□□ -0.11
RAB4AP20338 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB4AP20338 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB4AP20338 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB4AP20338 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB4AP20338 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB4AP20338 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB4AP20338 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB4AP20338 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
RAB4AP20338 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB4AP20338 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB4AP20338 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB4AP20338 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB4AP20338 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB4AP20338 UNC93B3-201ENST00000308076 687 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms