Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDGFRAP16234 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.76■□□□□ 0.75
PDGFRAP16234 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFRAP16234 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDGFRAP16234 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDGFRAP16234 AL512353.2-201ENST00000448759 1962 ntBASIC19.75■□□□□ 0.75
PDGFRAP16234 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
PDGFRAP16234 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFRAP16234 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFRAP16234 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 FITM1-202ENST00000559294 800 ntBASIC19.75■□□□□ 0.75
PDGFRAP16234 AP005242.2-201ENST00000580065 1175 ntBASIC19.75■□□□□ 0.75
PDGFRAP16234 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFRAP16234 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFRAP16234 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDGFRAP16234 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.74■□□□□ 0.75
PDGFRAP16234 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 AC093525.10-201ENST00000625130 1569 ntBASIC19.74■□□□□ 0.75
PDGFRAP16234 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.74■□□□□ 0.75
PDGFRAP16234 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.74■□□□□ 0.75
PDGFRAP16234 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
PDGFRAP16234 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.74■□□□□ 0.75
PDGFRAP16234 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.74■□□□□ 0.75
PDGFRAP16234 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PDGFRAP16234 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 AL031598.1-201ENST00000561511 1773 ntBASIC19.74■□□□□ 0.75
PDGFRAP16234 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFRAP16234 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.73■□□□□ 0.75
PDGFRAP16234 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.73■□□□□ 0.75
PDGFRAP16234 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 KRT8P32-201ENST00000512863 1461 ntBASIC19.73■□□□□ 0.75
PDGFRAP16234 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.73■□□□□ 0.75
PDGFRAP16234 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PDGFRAP16234 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.73■□□□□ 0.75
PDGFRAP16234 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 HEIH-201ENST00000623091 1652 ntBASIC19.73■□□□□ 0.75
PDGFRAP16234 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.73■□□□□ 0.75
PDGFRAP16234 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDGFRAP16234 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
PDGFRAP16234 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PDGFRAP16234 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDGFRAP16234 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFRAP16234 Z98044.1-201ENST00000632503 1764 ntBASIC19.72■□□□□ 0.75
PDGFRAP16234 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
PDGFRAP16234 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDGFRAP16234 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFRAP16234 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFRAP16234 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDGFRAP16234 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFRAP16234 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFRAP16234 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.72■□□□□ 0.75
PDGFRAP16234 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.72■□□□□ 0.75
PDGFRAP16234 LINC01023-201ENST00000606054 436 ntBASIC19.72■□□□□ 0.75
PDGFRAP16234 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFRAP16234 AC068587.9-201ENST00000641814 219 ntBASIC19.72■□□□□ 0.75
PDGFRAP16234 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFRAP16234 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.72■□□□□ 0.75
PDGFRAP16234 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFRAP16234 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.72■□□□□ 0.75
PDGFRAP16234 CYP2D8P-201ENST00000433633 1490 ntBASIC19.72■□□□□ 0.75
PDGFRAP16234 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDGFRAP16234 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
PDGFRAP16234 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.72■□□□□ 0.75
PDGFRAP16234 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PDGFRAP16234 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFRAP16234 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms