Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARBP10826 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARBP10826 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARBP10826 LINC01006-201ENST00000333319 2292 ntBASIC21.06■□□□□ 0.96
RARBP10826 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.06■□□□□ 0.96
RARBP10826 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.06■□□□□ 0.96
RARBP10826 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RARBP10826 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RARBP10826 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.06■□□□□ 0.96
RARBP10826 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.06■□□□□ 0.96
RARBP10826 AL160237.2-201ENST00000556165 472 ntBASIC21.06■□□□□ 0.96
RARBP10826 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RARBP10826 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.06■□□□□ 0.96
RARBP10826 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.05■□□□□ 0.96
RARBP10826 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.05■□□□□ 0.96
RARBP10826 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 KRT18P31-201ENST00000506277 1292 ntBASIC21.05■□□□□ 0.96
RARBP10826 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.05■□□□□ 0.96
RARBP10826 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.05■□□□□ 0.96
RARBP10826 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 AC104692.2-201ENST00000603054 253 ntBASIC21.05■□□□□ 0.96
RARBP10826 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.05■□□□□ 0.96
RARBP10826 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.05■□□□□ 0.96
RARBP10826 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.05■□□□□ 0.96
RARBP10826 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.05■□□□□ 0.96
RARBP10826 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RARBP10826 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RARBP10826 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RARBP10826 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.05■□□□□ 0.96
RARBP10826 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RARBP10826 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 Z83836.1-201ENST00000624605 1642 ntBASIC21.04■□□□□ 0.96
RARBP10826 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RARBP10826 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RARBP10826 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RARBP10826 KRT18P23-201ENST00000435622 1283 ntBASIC21.04■□□□□ 0.96
RARBP10826 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.04■□□□□ 0.96
RARBP10826 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.04■□□□□ 0.96
RARBP10826 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.04■□□□□ 0.96
RARBP10826 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.04■□□□□ 0.96
RARBP10826 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RARBP10826 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.04■□□□□ 0.96
RARBP10826 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.04■□□□□ 0.96
RARBP10826 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RARBP10826 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.04■□□□□ 0.96
RARBP10826 KRT8P7-201ENST00000533003 1432 ntBASIC21.04■□□□□ 0.96
RARBP10826 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.03■□□□□ 0.96
RARBP10826 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.03■□□□□ 0.96
RARBP10826 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.03■□□□□ 0.96
RARBP10826 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
RARBP10826 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.03■□□□□ 0.96
RARBP10826 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RARBP10826 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RARBP10826 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RARBP10826 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RARBP10826 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.03■□□□□ 0.96
RARBP10826 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RARBP10826 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.03■□□□□ 0.96
RARBP10826 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RARBP10826 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.02■□□□□ 0.96
RARBP10826 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.02■□□□□ 0.96
RARBP10826 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 AL022342.1-201ENST00000400363 863 ntBASIC21.02■□□□□ 0.96
RARBP10826 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RARBP10826 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.02■□□□□ 0.96
RARBP10826 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 AC079781.3-201ENST00000449110 356 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms