Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 AL023284.2-201ENST00000405850 579 ntBASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 AC034232.1-201ENST00000506026 1064 ntBASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 VENTXP5-201ENST00000523979 775 ntBASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 LINC01311-201ENST00000565162 1445 ntBASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 MIR3180-5-201ENST00000583743 153 ntBASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 AC083849.1-201ENST00000615227 514 ntBASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40ALP0C0E4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 MCCD1P1-208ENST00000445732 328 ntBASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 AC116562.4-201ENST00000641316 2276 ntBASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40ALP0C0E4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms