Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CSF1P09603 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.28■□□□□ 0.2
CSF1P09603 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.28■□□□□ 0.2
CSF1P09603 AC083880.1-201ENST00000608266 535 ntBASIC16.28■□□□□ 0.2
CSF1P09603 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.28■□□□□ 0.2
CSF1P09603 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.27■□□□□ 0.2
CSF1P09603 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CSF1P09603 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.27■□□□□ 0.2
CSF1P09603 AL158047.1-201ENST00000445918 881 ntBASIC16.27■□□□□ 0.2
CSF1P09603 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CSF1P09603 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.27■□□□□ 0.2
CSF1P09603 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.27■□□□□ 0.2
CSF1P09603 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.27■□□□□ 0.2
CSF1P09603 AC006058.3-201ENST00000606217 1069 ntBASIC16.27■□□□□ 0.2
CSF1P09603 AC083906.6-201ENST00000641366 219 ntBASIC16.27■□□□□ 0.2
CSF1P09603 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.27■□□□□ 0.2
CSF1P09603 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CSF1P09603 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSF1P09603 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSF1P09603 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CSF1P09603 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSF1P09603 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.27■□□□□ 0.19
CSF1P09603 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CSF1P09603 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSF1P09603 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSF1P09603 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSF1P09603 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 AC073592.3-201ENST00000625118 1834 ntBASIC16.26■□□□□ 0.19
CSF1P09603 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.26■□□□□ 0.19
CSF1P09603 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.26■□□□□ 0.19
CSF1P09603 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 AC091874.3-201ENST00000512672 1195 ntBASIC16.26■□□□□ 0.19
CSF1P09603 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.26■□□□□ 0.19
CSF1P09603 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.26■□□□□ 0.19
CSF1P09603 AC142381.4-202ENST00000563973 229 ntBASIC16.26■□□□□ 0.19
CSF1P09603 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.26■□□□□ 0.19
CSF1P09603 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.26■□□□□ 0.19
CSF1P09603 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSF1P09603 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CSF1P09603 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSF1P09603 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSF1P09603 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CSF1P09603 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.25■□□□□ 0.19
CSF1P09603 GCSHP5-201ENST00000443090 522 ntBASIC16.25■□□□□ 0.19
CSF1P09603 AC098590.1-201ENST00000468126 897 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms