Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.58■□□□□ 0.89
CLTAP09496 BX323043.1-201ENST00000641006 1765 ntBASIC20.58■□□□□ 0.89
CLTAP09496 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.58■□□□□ 0.88
CLTAP09496 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLTAP09496 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLTAP09496 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.58■□□□□ 0.88
CLTAP09496 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLTAP09496 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLTAP09496 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLTAP09496 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLTAP09496 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CLTAP09496 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLTAP09496 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTAP09496 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTAP09496 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTAP09496 LIN28AP1-201ENST00000429574 405 ntBASIC20.57■□□□□ 0.88
CLTAP09496 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLTAP09496 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CLTAP09496 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLTAP09496 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CLTAP09496 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLTAP09496 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLTAP09496 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTAP09496 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTAP09496 ATP5G1P1-201ENST00000448724 379 ntBASIC20.56■□□□□ 0.88
CLTAP09496 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTAP09496 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTAP09496 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
CLTAP09496 AC008622.2-201ENST00000617006 1229 ntBASIC20.56■□□□□ 0.88
CLTAP09496 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTAP09496 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CLTAP09496 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTAP09496 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTAP09496 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLTAP09496 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTAP09496 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTAP09496 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
CLTAP09496 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.55■□□□□ 0.88
CLTAP09496 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTAP09496 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CLTAP09496 AL512604.3-201ENST00000569583 964 ntBASIC20.55■□□□□ 0.88
CLTAP09496 RN7SL850P-201ENST00000579959 291 ntBASIC20.55■□□□□ 0.88
CLTAP09496 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTAP09496 AC138932.1-201ENST00000534164 6830 ntBASIC20.55■□□□□ 0.88
CLTAP09496 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTAP09496 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CLTAP09496 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.55■□□□□ 0.88
CLTAP09496 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTAP09496 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTAP09496 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.54■□□□□ 0.88
CLTAP09496 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.54■□□□□ 0.88
CLTAP09496 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLTAP09496 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CLTAP09496 TMPOP1-202ENST00000424642 1267 ntBASIC20.54■□□□□ 0.88
CLTAP09496 KRT18P57-201ENST00000443599 1254 ntBASIC20.54■□□□□ 0.88
CLTAP09496 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 AIRN-201ENST00000601203 4374 ntBASIC20.54■□□□□ 0.88
CLTAP09496 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTAP09496 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTAP09496 AL161938.1-201ENST00000569833 2180 ntBASIC20.53■□□□□ 0.88
CLTAP09496 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLTAP09496 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.53■□□□□ 0.88
CLTAP09496 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLTAP09496 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms