Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 TSPY23P-201ENST00000440136 739 ntBASIC17.07■□□□□ 0.32
HMGN1P05114 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGN1P05114 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 IKBKGP1-201ENST00000612193 1073 ntBASIC17.07■□□□□ 0.32
HMGN1P05114 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGN1P05114 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGN1P05114 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGN1P05114 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGN1P05114 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGN1P05114 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGN1P05114 SOX15-203ENST00000570788 1093 ntBASIC17.06■□□□□ 0.32
HMGN1P05114 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGN1P05114 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGN1P05114 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGN1P05114 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGN1P05114 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HMGN1P05114 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGN1P05114 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGN1P05114 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMGN1P05114 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMGN1P05114 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGN1P05114 TSPY6P-201ENST00000448518 926 ntBASIC17.05■□□□□ 0.32
HMGN1P05114 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 PRKY-204ENST00000533551 1019 ntBASIC17.05■□□□□ 0.32
HMGN1P05114 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGN1P05114 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGN1P05114 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGN1P05114 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGN1P05114 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMGN1P05114 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGN1P05114 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 LTB4R2-202ENST00000528054 3092 ntBASIC17.04■□□□□ 0.32
HMGN1P05114 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HMGN1P05114 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGN1P05114 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.04■□□□□ 0.32
HMGN1P05114 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGN1P05114 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HMGN1P05114 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGN1P05114 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HMGN1P05114 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HMGN1P05114 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms