Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 UNC93B5-201ENST00000530315 699 ntBASIC16.93■□□□□ 0.3
HLA-DPB1P04440 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.93■□□□□ 0.3
HLA-DPB1P04440 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 TFP1-202ENST00000475455 1573 ntBASIC16.93■□□□□ 0.3
HLA-DPB1P04440 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DPB1P04440 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 AC104417.2-201ENST00000562989 1793 ntBASIC16.92■□□□□ 0.3
HLA-DPB1P04440 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 SDHAP1-207ENST00000440850 2000 ntBASIC16.92■□□□□ 0.3
HLA-DPB1P04440 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DPB1P04440 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.91■□□□□ 0.3
HLA-DPB1P04440 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 RPS2P52-201ENST00000469610 820 ntBASIC16.91■□□□□ 0.3
HLA-DPB1P04440 UNC93B4-201ENST00000505679 747 ntBASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CD99P1-205ENST00000527459 561 ntBASIC16.91■□□□□ 0.3
HLA-DPB1P04440 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 AC008687.6-201ENST00000596318 630 ntBASIC16.91■□□□□ 0.3
HLA-DPB1P04440 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms