Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.21■□□□□ 0.35
P04436 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 WWOX-216ENST00000569818 525 ntBASIC17.21■□□□□ 0.35
P04436 MIR3180-5-201ENST00000583743 153 ntBASIC17.21■□□□□ 0.35
P04436 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
P04436 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
P04436 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
P04436 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04436 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.21■□□□□ 0.34
P04436 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.21■□□□□ 0.34
P04436 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.2■□□□□ 0.34
P04436 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.2■□□□□ 0.34
P04436 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.2■□□□□ 0.34
P04436 AC087388.1-201ENST00000571370 1112 ntBASIC17.2■□□□□ 0.34
P04436 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.2■□□□□ 0.34
P04436 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.2■□□□□ 0.34
P04436 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.2■□□□□ 0.34
P04436 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.2■□□□□ 0.34
P04436 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
P04436 AL512353.2-201ENST00000448759 1962 ntBASIC17.2■□□□□ 0.34
P04436 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P04436 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 AC036111.1-201ENST00000533973 1582 ntBASIC17.19■□□□□ 0.34
P04436 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.19■□□□□ 0.34
P04436 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
P04436 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.19■□□□□ 0.34
P04436 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.19■□□□□ 0.34
P04436 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.19■□□□□ 0.34
P04436 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.19■□□□□ 0.34
P04436 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.19■□□□□ 0.34
P04436 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.19■□□□□ 0.34
P04436 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.19■□□□□ 0.34
P04436 HOMER2P1-201ENST00000455653 964 ntBASIC17.19■□□□□ 0.34
P04436 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.19■□□□□ 0.34
P04436 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
P04436 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.19■□□□□ 0.34
P04436 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
P04436 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 RCC2P3-201ENST00000418112 1537 ntBASIC17.19■□□□□ 0.34
P04436 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.19■□□□□ 0.34
P04436 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04436 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.18■□□□□ 0.34
P04436 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.18■□□□□ 0.34
P04436 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.18■□□□□ 0.34
P04436 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
P04436 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.18■□□□□ 0.34
P04436 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.18■□□□□ 0.34
P04436 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.18■□□□□ 0.34
P04436 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
P04436 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04436 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04436 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P04436 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms