Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 AC004980.1-204ENST00000429707 299 ntBASIC18.25■□□□□ 0.51
KRT6AP02538 KSR1P1-201ENST00000446298 240 ntBASIC18.25■□□□□ 0.51
KRT6AP02538 PRSS44-201ENST00000515154 1146 ntBASIC18.25■□□□□ 0.51
KRT6AP02538 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.25■□□□□ 0.51
KRT6AP02538 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT6AP02538 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KRT6AP02538 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.24■□□□□ 0.51
KRT6AP02538 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT6AP02538 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 C1QBPP2-201ENST00000528754 825 ntBASIC18.24■□□□□ 0.51
KRT6AP02538 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT6AP02538 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KRT6AP02538 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT6AP02538 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT6AP02538 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT6AP02538 NEFHP1-201ENST00000412845 2629 ntBASIC18.24■□□□□ 0.51
KRT6AP02538 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT6AP02538 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT6AP02538 KRT8P11-201ENST00000409686 1436 ntBASIC18.23■□□□□ 0.51
KRT6AP02538 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT6AP02538 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT6AP02538 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT6AP02538 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT6AP02538 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT6AP02538 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.23■□□□□ 0.51
KRT6AP02538 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT6AP02538 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT6AP02538 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT6AP02538 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT6AP02538 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 AC104581.1-202ENST00000635932 2618 ntBASIC18.22■□□□□ 0.51
KRT6AP02538 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 AC009113.1-201ENST00000570267 2443 ntBASIC18.22■□□□□ 0.51
KRT6AP02538 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
KRT6AP02538 RCC2P6-201ENST00000526625 1557 ntBASIC18.22■□□□□ 0.51
KRT6AP02538 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
KRT6AP02538 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT6AP02538 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.22■□□□□ 0.51
KRT6AP02538 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
KRT6AP02538 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRT6AP02538 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.22■□□□□ 0.51
KRT6AP02538 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT6AP02538 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.22■□□□□ 0.51
KRT6AP02538 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRT6AP02538 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
KRT6AP02538 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms