Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ZIC3O60481 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 MIR1224-201ENST00000408193 85 ntBASIC16.94■□□□□ 0.3
ZIC3O60481 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.94■□□□□ 0.3
ZIC3O60481 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.94■□□□□ 0.3
ZIC3O60481 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
ZIC3O60481 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.94■□□□□ 0.3
ZIC3O60481 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.94■□□□□ 0.3
ZIC3O60481 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ZIC3O60481 AL023973.1-201ENST00000624619 620 ntBASIC16.94■□□□□ 0.3
ZIC3O60481 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ZIC3O60481 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.94■□□□□ 0.3
ZIC3O60481 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZIC3O60481 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.94■□□□□ 0.3
ZIC3O60481 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ZIC3O60481 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ZIC3O60481 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ZIC3O60481 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.94■□□□□ 0.3
ZIC3O60481 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.93■□□□□ 0.3
ZIC3O60481 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.93■□□□□ 0.3
ZIC3O60481 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.93■□□□□ 0.3
ZIC3O60481 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.93■□□□□ 0.3
ZIC3O60481 RNF152P1-201ENST00000397754 604 ntBASIC16.93■□□□□ 0.3
ZIC3O60481 TSPY5P-201ENST00000426936 936 ntBASIC16.93■□□□□ 0.3
ZIC3O60481 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.93■□□□□ 0.3
ZIC3O60481 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.93■□□□□ 0.3
ZIC3O60481 AL049597.2-201ENST00000565575 961 ntBASIC16.93■□□□□ 0.3
ZIC3O60481 AC083906.6-201ENST00000641366 219 ntBASIC16.93■□□□□ 0.3
ZIC3O60481 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ZIC3O60481 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ZIC3O60481 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ZIC3O60481 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ZIC3O60481 AC006333.2-201ENST00000607957 2099 ntBASIC16.93■□□□□ 0.3
ZIC3O60481 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.93■□□□□ 0.3
ZIC3O60481 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.93■□□□□ 0.3
ZIC3O60481 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZIC3O60481 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.93■□□□□ 0.3
ZIC3O60481 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.92■□□□□ 0.3
ZIC3O60481 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.92■□□□□ 0.3
ZIC3O60481 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ZIC3O60481 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.92■□□□□ 0.3
ZIC3O60481 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.92■□□□□ 0.3
ZIC3O60481 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.92■□□□□ 0.3
ZIC3O60481 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.92■□□□□ 0.3
ZIC3O60481 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
ZIC3O60481 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.92■□□□□ 0.3
ZIC3O60481 AL441883.1-201ENST00000566170 1045 ntBASIC16.92■□□□□ 0.3
ZIC3O60481 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.92■□□□□ 0.3
ZIC3O60481 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.92■□□□□ 0.3
ZIC3O60481 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.92■□□□□ 0.3
ZIC3O60481 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms