Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH7O60245 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDH7O60245 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
PCDH7O60245 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 FAM197Y1-201ENST00000421178 764 ntBASIC17.99■□□□□ 0.47
PCDH7O60245 FAM207BP-201ENST00000447172 505 ntBASIC17.99■□□□□ 0.47
PCDH7O60245 AC098590.1-201ENST00000468126 897 ntBASIC17.99■□□□□ 0.47
PCDH7O60245 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDH7O60245 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH7O60245 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH7O60245 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH7O60245 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 HEIH-201ENST00000623091 1652 ntBASIC17.99■□□□□ 0.47
PCDH7O60245 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDH7O60245 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH7O60245 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH7O60245 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH7O60245 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDH7O60245 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDH7O60245 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.98■□□□□ 0.47
PCDH7O60245 AL158047.1-201ENST00000445918 881 ntBASIC17.98■□□□□ 0.47
PCDH7O60245 AC008040.2-201ENST00000461049 708 ntBASIC17.98■□□□□ 0.47
PCDH7O60245 B3GAT3P1-201ENST00000471720 806 ntBASIC17.98■□□□□ 0.47
PCDH7O60245 AC011506.1-201ENST00000474329 610 ntBASIC17.98■□□□□ 0.47
PCDH7O60245 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH7O60245 MIR6786-201ENST00000616843 113 ntBASIC17.98■□□□□ 0.47
PCDH7O60245 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH7O60245 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH7O60245 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDH7O60245 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDH7O60245 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH7O60245 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH7O60245 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH7O60245 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 AC009113.1-201ENST00000570267 2443 ntBASIC17.97■□□□□ 0.47
PCDH7O60245 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDH7O60245 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDH7O60245 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH7O60245 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDH7O60245 AC130371.2-201ENST00000619443 611 ntBASIC17.97■□□□□ 0.47
PCDH7O60245 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 KRT8P3-201ENST00000519669 1449 ntBASIC17.97■□□□□ 0.47
PCDH7O60245 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH7O60245 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDH7O60245 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH7O60245 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDH7O60245 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 AC005082.1-201ENST00000413042 2259 ntBASIC17.96■□□□□ 0.47
PCDH7O60245 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.96■□□□□ 0.47
PCDH7O60245 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH7O60245 GCSHP5-201ENST00000443090 522 ntBASIC17.96■□□□□ 0.47
PCDH7O60245 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
PCDH7O60245 CKBP1-201ENST00000565489 1086 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms