Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL21O00585 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL21O00585 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL21O00585 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL21O00585 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL21O00585 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 AL109659.2-201ENST00000606809 1674 ntBASIC16.56■□□□□ 0.24
CCL21O00585 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 AC092667.1-201ENST00000434301 2586 ntBASIC16.56■□□□□ 0.24
CCL21O00585 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 LINC00167-201ENST00000530583 1419 ntBASIC16.56■□□□□ 0.24
CCL21O00585 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CCL21O00585 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.56■□□□□ 0.24
CCL21O00585 AL662844.1-201ENST00000546340 181 ntBASIC16.56■□□□□ 0.24
CCL21O00585 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL21O00585 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.56■□□□□ 0.24
CCL21O00585 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 AC099336.1-202ENST00000602961 463 ntBASIC16.56■□□□□ 0.24
CCL21O00585 AC023511.2-201ENST00000618803 211 ntBASIC16.56■□□□□ 0.24
CCL21O00585 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 AC008556.1-201ENST00000610908 2040 ntBASIC16.56■□□□□ 0.24
CCL21O00585 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCL21O00585 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCL21O00585 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CCL21O00585 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL21O00585 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.55■□□□□ 0.24
CCL21O00585 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.55■□□□□ 0.24
CCL21O00585 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL21O00585 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCL21O00585 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCL21O00585 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.55■□□□□ 0.24
CCL21O00585 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCL21O00585 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCL21O00585 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL21O00585 AP002469.2-201ENST00000531724 424 ntBASIC16.55■□□□□ 0.24
CCL21O00585 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.55■□□□□ 0.24
CCL21O00585 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL21O00585 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.55■□□□□ 0.24
CCL21O00585 Z69720.1-201ENST00000601483 472 ntBASIC16.55■□□□□ 0.24
CCL21O00585 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCL21O00585 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCL21O00585 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 TCF3P1-201ENST00000423021 1937 ntBASIC16.55■□□□□ 0.24
CCL21O00585 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCL21O00585 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL21O00585 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL21O00585 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCL21O00585 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL21O00585 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL21O00585 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL21O00585 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL21O00585 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL21O00585 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms