Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC188H7C350 AC026185.1-201ENST00000445748 174 ntBASIC19.59■□□□□ 0.73
CCDC188H7C350 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC188H7C350 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.59■□□□□ 0.73
CCDC188H7C350 RARRES2P6-201ENST00000567333 442 ntBASIC19.59■□□□□ 0.73
CCDC188H7C350 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC188H7C350 ESPNP-201ENST00000270691 2015 ntBASIC19.59■□□□□ 0.73
CCDC188H7C350 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC188H7C350 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CCDC188H7C350 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC188H7C350 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC188H7C350 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC188H7C350 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC188H7C350 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC188H7C350 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC188H7C350 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC188H7C350 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC188H7C350 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.58■□□□□ 0.72
CCDC188H7C350 HLA-A-209ENST00000638375 975 ntBASIC19.58■□□□□ 0.72
CCDC188H7C350 AC068587.9-201ENST00000641814 219 ntBASIC19.58■□□□□ 0.72
CCDC188H7C350 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC188H7C350 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC188H7C350 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC188H7C350 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.58■□□□□ 0.72
CCDC188H7C350 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC188H7C350 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC188H7C350 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC188H7C350 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
CCDC188H7C350 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC188H7C350 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC188H7C350 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC188H7C350 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCDC188H7C350 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC188H7C350 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC188H7C350 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC188H7C350 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC188H7C350 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC188H7C350 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC188H7C350 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 AL121832.2-201ENST00000610979 668 ntBASIC19.57■□□□□ 0.72
CCDC188H7C350 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
CCDC188H7C350 AL499627.1-201ENST00000569373 2188 ntBASIC19.57■□□□□ 0.72
CCDC188H7C350 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC188H7C350 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC188H7C350 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC188H7C350 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC188H7C350 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC188H7C350 BCL2-203ENST00000589955 5011 ntBASIC19.56■□□□□ 0.72
CCDC188H7C350 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC188H7C350 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC188H7C350 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC188H7C350 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 SLC25A6P5-201ENST00000435663 894 ntBASIC19.56■□□□□ 0.72
CCDC188H7C350 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 AC097658.1-201ENST00000475555 843 ntBASIC19.56■□□□□ 0.72
CCDC188H7C350 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC188H7C350 MYC-209ENST00000641252 345 ntBASIC19.56■□□□□ 0.72
CCDC188H7C350 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC188H7C350 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC188H7C350 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms