Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC011558.1-201ENST00000623459 338 ntBASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC093484.2-201ENST00000580996 2166 ntBASIC18.47■□□□□ 0.55
TMX2-CTNND1H3BSU7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMX2-CTNND1H3BSU7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMX2-CTNND1H3BSU7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TMX2-CTNND1H3BSU7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms