Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 AP000593.1-201ENST00000393668 712 ntBASIC23.78■■□□□ 1.4
LAMB4A4D0S4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 TSSC2-201ENST00000450217 709 ntBASIC23.78■■□□□ 1.4
LAMB4A4D0S4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 TSPY22P-201ENST00000427496 604 ntBASIC23.77■■□□□ 1.4
LAMB4A4D0S4 DRAXINP1-201ENST00000437611 948 ntBASIC23.77■■□□□ 1.4
LAMB4A4D0S4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 AC111152.3-201ENST00000569699 673 ntBASIC23.77■■□□□ 1.4
LAMB4A4D0S4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.77■■□□□ 1.4
LAMB4A4D0S4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.39
LAMB4A4D0S4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 MIR3180-4-201ENST00000582223 153 ntBASIC23.76■■□□□ 1.39
LAMB4A4D0S4 AP002414.4-201ENST00000589764 1148 ntBASIC23.76■■□□□ 1.39
LAMB4A4D0S4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.76■■□□□ 1.39
LAMB4A4D0S4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.76■■□□□ 1.39
LAMB4A4D0S4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AL032819.2-201ENST00000624543 2162 ntBASIC23.75■■□□□ 1.39
LAMB4A4D0S4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 MIR564-202ENST00000385049 94 ntBASIC23.75■■□□□ 1.39
LAMB4A4D0S4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LAMB4A4D0S4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 AL161938.1-201ENST00000569833 2180 ntBASIC23.74■■□□□ 1.39
LAMB4A4D0S4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 KRT89P-201ENST00000620027 1478 ntBASIC23.74■■□□□ 1.39
LAMB4A4D0S4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.74■■□□□ 1.39
LAMB4A4D0S4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms