Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 TUBB8P6-201ENST00000436895 1288 ntBASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 AC068587.9-201ENST00000641814 219 ntBASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TCRBV3S1A0A5B6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 AL121906.2-201ENST00000621597 723 ntBASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV3S1A0A5B6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 AC231657.2-201ENST00000624556 255 ntBASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV3S1A0A5B6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms