Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 AC131212.4-201ENST00000623606 975 ntBASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TCRBV7S3A2A0A539 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 KRT8P32-201ENST00000512863 1461 ntBASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 AC020763.4-201ENST00000623414 4170 ntBASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV7S3A2A0A539 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 AC079598.2-202ENST00000546624 1451 ntBASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV7S3A2A0A539 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
TCRBV7S3A2A0A539 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.14■□□□□ 0.66
TCRBV7S3A2A0A539 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 C1QBPP2-201ENST00000528754 825 ntBASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV7S3A2A0A539 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 LETM1P2-201ENST00000597330 2178 ntBASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV7S3A2A0A539 AP002982.1-201ENST00000492365 877 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms