Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 NOC2LP2-201ENST00000407594 1944 ntBASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 NOC2LP1-202ENST00000452600 2235 ntBASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 AL031598.1-201ENST00000561511 1773 ntBASIC18.14■□□□□ 0.5
RNF103-CHMP3A0A140T963 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF103-CHMP3A0A140T963 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF103-CHMP3A0A140T963 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 UNC93B4-201ENST00000505679 747 ntBASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF103-CHMP3A0A140T963 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC068880.1-201ENST00000507289 2297 ntBASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RNF103-CHMP3A0A140T963 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms