Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.9■□□□□ 0.3
TRGV5A0A0B4J1U4 IER3-202ENST00000376377 1350 ntBASIC16.89■□□□□ 0.3
TRGV5A0A0B4J1U4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRGV5A0A0B4J1U4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRGV5A0A0B4J1U4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRGV5A0A0B4J1U4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRGV5A0A0B4J1U4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.89■□□□□ 0.3
TRGV5A0A0B4J1U4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 VENTXP5-201ENST00000523979 775 ntBASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
TRGV5A0A0B4J1U4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AL032819.2-201ENST00000624543 2162 ntBASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AC008556.1-201ENST00000610908 2040 ntBASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AL136038.3-201ENST00000561909 1096 ntBASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 AC005332.1-201ENST00000577698 1310 ntBASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRGV5A0A0B4J1U4 KRT8P32-201ENST00000512863 1461 ntBASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 AC083849.1-201ENST00000615227 514 ntBASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 HYMAI.1-201ENST00000620949 238 ntBASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 AC093484.2-201ENST00000580996 2166 ntBASIC16.87■□□□□ 0.29
TRGV5A0A0B4J1U4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms