Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 AC007613.1-201ENST00000572811 2597 ntBASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV30A0A087WSZ9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 AC239809.2-201ENST00000415381 517 ntBASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 HLA-L-209ENST00000420110 1011 ntBASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 AP000997.3-201ENST00000623333 2250 ntBASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 AC011270.2-201ENST00000624293 2550 ntBASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV30A0A087WSZ9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 AL512353.2-201ENST00000448759 1962 ntBASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV30A0A087WSZ9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms