Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SNORA73.2-201ENST00000364946 201 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 SNORA56-201ENST00000383966 129 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU1-95P-201ENST00000516357 160 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 SNORA64.4-201ENST00000516632 81 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU1-128P-201ENST00000516704 160 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 SCARNA20.6-201ENST00000517251 106 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 AC073476.4-201ENST00000628409 72 ntBASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 SNORD60-201ENST00000383903 83 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 RNA5SP356-201ENST00000515972 94 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU1-143P-201ENST00000516296 146 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 U1.23-201ENST00000610293 146 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR6820-201ENST00000611508 62 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU1-68P-201ENST00000615382 146 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR6758-201ENST00000620653 63 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 U1.39-201ENST00000621562 146 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR6733-201ENST00000635723 61 ntBASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP3-3Q9BYR6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR148B-201ENST00000362252 99 ntBASIC1.66□□□□□ -2.14
KRTAP3-3Q9BYR6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP3-3Q9BYR6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP3-3Q9BYR6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP3-3Q9BYR6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP3-3Q9BYR6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 RNA5SP119-201ENST00000362715 117 ntBASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 AP000676.1-201ENST00000533307 52 ntBASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR5685-201ENST00000579080 79 ntBASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP3-3Q9BYR6 AC093908.1-201ENST00000623125 8092 ntBASIC1.64□□□□□ -2.15
KRTAP3-3Q9BYR6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP3-3Q9BYR6 ZYXP1-201ENST00000617638 118 ntBASIC1.64□□□□□ -2.15
KRTAP3-3Q9BYR6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP3-3Q9BYR6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP3-3Q9BYR6 SNORD17-201ENST00000390930 237 ntBASIC1.63□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR937-201ENST00000401271 86 ntBASIC1.63□□□□□ -2.15
KRTAP3-3Q9BYR6 AC084368.1-201ENST00000620935 65 ntBASIC1.63□□□□□ -2.15
KRTAP3-3Q9BYR6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP3-3Q9BYR6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP3-3Q9BYR6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP3-3Q9BYR6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 RNA5SP229-201ENST00000410809 99 ntBASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 AC115115.1-201ENST00000449927 248 ntBASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 SNORD105B-201ENST00000458770 79 ntBASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 uc_338.1-201ENST00000612113 180 ntBASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-3Q9BYR6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 RNU6-836P-201ENST00000362920 107 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 SNORA2A-201ENST00000383885 135 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR34B-201ENST00000385076 84 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 RNU6-628P-201ENST00000410675 107 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 AC025518.1-201ENST00000479856 347 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 RNA5SP217-201ENST00000515959 91 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR4677-201ENST00000584153 80 ntBASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
KRTAP3-3Q9BYR6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 SNORA80A-201ENST00000363922 136 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 Y_RNA.406-201ENST00000383984 100 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 SNORD19-201ENST00000391191 68 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR548N-201ENST00000408742 75 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 RNA5SP380-201ENST00000517190 98 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR2116-201ENST00000517221 80 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR7851-201ENST00000610611 160 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 AL391099.1-201ENST00000624635 187 ntBASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP3-3Q9BYR6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 Y_RNA.129-201ENST00000363392 110 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR141-201ENST00000384975 95 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR643-201ENST00000385267 97 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 RNU6-1133P-201ENST00000410963 100 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR4443-201ENST00000585052 53 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 MIR378J-201ENST00000611988 109 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 RN7SL660P-201ENST00000614852 299 ntBASIC1.59□□□□□ -2.15
KRTAP3-3Q9BYR6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP3-3Q9BYR6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP3-3Q9BYR6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP3-3Q9BYR6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP3-3Q9BYR6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP3-3Q9BYR6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP3-3Q9BYR6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 RNU6-1233P-201ENST00000362922 102 ntBASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR4700-201ENST00000578311 74 ntBASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR2682-201ENST00000580305 110 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 295.8 ms