RNA–Protein interactions for RNA: ENST00000410963.1

RNU6-1133P-201, Transcript of RNA, U6 small nuclear 1133, pseudogene, humanhuman

BASIC

Gene RNU6-1133P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1133P-201ENST00000410963 AEBP2Q6ZN18 517 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1133P-201ENST00000410963 POTEDQ86YR6 584 aa3.21□□□□□ -1.9
RNU6-1133P-201ENST00000410963 CHIC1Q5VXU3 224 aa3.2□□□□□ -1.9
RNU6-1133P-201ENST00000410963 SENP3Q9H4L4 574 aaPredicted RBP3□□□□□ -1.93
RNU6-1133P-201ENST00000410963 PHF23Q9BUL5 403 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1133P-201ENST00000410963 FOXD1Q16676 465 aa2.83□□□□□ -1.96
RNU6-1133P-201ENST00000410963 MSH5O43196 834 aa2.76□□□□□ -1.97
RNU6-1133P-201ENST00000410963 PIAS4Q8N2W9 510 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1133P-201ENST00000410963 CACNB1Q02641 598 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1133P-201ENST00000410963 POTEHQ6S545 545 aa2.44□□□□□ -2.02
RNU6-1133P-201ENST00000410963 PPP6R1Q9UPN7 881 aa2.4□□□□□ -2.03
RNU6-1133P-201ENST00000410963 RNF39Q9H2S5 420 aa2.35□□□□□ -2.03
RNU6-1133P-201ENST00000410963 DMRT2Q9Y5R5 561 aa2.35□□□□□ -2.03
RNU6-1133P-201ENST00000410963 ADRA2BP18089 450 aa2.33□□□□□ -2.04
RNU6-1133P-201ENST00000410963 C1QBPQ07021 282 aaKnown RBP2.3□□□□□ -2.04
RNU6-1133P-201ENST00000410963 DNAJC5BQ9UF47 199 aa2.24□□□□□ -2.05
RNU6-1133P-201ENST00000410963 MAPK8IP2Q13387 824 aaPredicted RBP2.23□□□□□ -2.05
RNU6-1133P-201ENST00000410963 PLPPR3Q6T4P5 718 aa2.23□□□□□ -2.05
RNU6-1133P-201ENST00000410963 HOXD11P31277 338 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1133P-201ENST00000410963 SCAF1Q9H7N4 1312 aaKnown RBP2.15□□□□□ -2.07
RNU6-1133P-201ENST00000410963 SP7Q8TDD2 431 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1133P-201ENST00000410963 DCAF8L1A6NGE4 600 aa2.08□□□□□ -2.08
RNU6-1133P-201ENST00000410963 DSG3P32926 999 aa2.08□□□□□ -2.08
RNU6-1133P-201ENST00000410963 CHRDL2Q6WN34 429 aa2.04□□□□□ -2.08
RNU6-1133P-201ENST00000410963 RNF216Q9NWF9 866 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1133P-201ENST00000410963 PLSCR2Q9NRY7 297 aa2.01□□□□□ -2.09
RNU6-1133P-201ENST00000410963 LHX8Q68G74 356 aa1.98□□□□□ -2.09
RNU6-1133P-201ENST00000410963 RBM42Q9BTD8 480 aaKnown RBP1.98□□□□□ -2.09
RNU6-1133P-201ENST00000410963 SPINK5Q9NQ38 1064 aaPredicted RBP1.97□□□□□ -2.09
RNU6-1133P-201ENST00000410963 CNKSR2Q8WXI2 1034 aa1.96□□□□□ -2.1
RNU6-1133P-201ENST00000410963 PIP4P2Q8N4L2 257 aa1.94□□□□□ -2.1
RNU6-1133P-201ENST00000410963 U3KPZ7 1027 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1133P-201ENST00000410963 EVX2Q03828 476 aa1.93□□□□□ -2.1
RNU6-1133P-201ENST00000410963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.93□□□□□ -2.1
RNU6-1133P-201ENST00000410963 PCDH10Q9P2E7 1040 aa1.93□□□□□ -2.1
RNU6-1133P-201ENST00000410963 CAPN15O75808 1086 aa1.92□□□□□ -2.1
RNU6-1133P-201ENST00000410963 FXR2P51116 673 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-1133P-201ENST00000410963 HAX1O00165 279 aa1.91□□□□□ -2.1
RNU6-1133P-201ENST00000410963 PPP4R3CPQ6ZMV5 832 aa1.9□□□□□ -2.11
RNU6-1133P-201ENST00000410963 AKT1S1Q96B36 256 aa1.88□□□□□ -2.11
RNU6-1133P-201ENST00000410963 POTEMA6NI47 508 aa1.87□□□□□ -2.11
RNU6-1133P-201ENST00000410963 GABBR2O75899 941 aa1.87□□□□□ -2.11
RNU6-1133P-201ENST00000410963 ZNF219Q9P2Y4 722 aaPredicted RBP1.87□□□□□ -2.11
RNU6-1133P-201ENST00000410963 C19orf67A6NJJ6 358 aa1.86□□□□□ -2.11
RNU6-1133P-201ENST00000410963 POTEIP0CG38 1075 aa1.86□□□□□ -2.11
RNU6-1133P-201ENST00000410963 POTEGQ6S5H5 508 aa1.86□□□□□ -2.11
RNU6-1133P-201ENST00000410963 REM2Q8IYK8 340 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1133P-201ENST00000410963 ABCB7O75027 752 aa1.83□□□□□ -2.12
RNU6-1133P-201ENST00000410963 APLP2Q06481 763 aa1.83□□□□□ -2.12
RNU6-1133P-201ENST00000410963 OTUD5Q96G74 571 aa1.83□□□□□ -2.12
RNU6-1133P-201ENST00000410963 PITPNM1O00562 1244 aa1.82□□□□□ -2.12
RNU6-1133P-201ENST00000410963 LCE2DQ5TA82 110 aaPredicted RBP1.82□□□□□ -2.12
RNU6-1133P-201ENST00000410963 TRHP20396 242 aaPredicted RBP1.8□□□□□ -2.12
RNU6-1133P-201ENST00000410963 CLCN6P51797 869 aa1.8□□□□□ -2.12
RNU6-1133P-201ENST00000410963 POTEB2H3BUK9 544 aa1.78□□□□□ -2.12
RNU6-1133P-201ENST00000410963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1133P-201ENST00000410963 HNRNPUL2Q1KMD3 747 aaKnown RBP1.76□□□□□ -2.13
RNU6-1133P-201ENST00000410963 SLC4A2P04920 1241 aa1.75□□□□□ -2.13
RNU6-1133P-201ENST00000410963 PRKAR2AP13861 404 aaKnown RBP1.74□□□□□ -2.13
RNU6-1133P-201ENST00000410963 SAMD1Q6SPF0 538 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1133P-201ENST00000410963 NPM3O75607 178 aaKnown RBP1.73□□□□□ -2.13
RNU6-1133P-201ENST00000410963 MMRN1Q13201 1228 aa1.73□□□□□ -2.13
RNU6-1133P-201ENST00000410963 POLA2Q14181 598 aa1.73□□□□□ -2.13
RNU6-1133P-201ENST00000410963 ZBTB12Q9Y330 459 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1133P-201ENST00000410963 POTEJP0CG39 1038 aa1.72□□□□□ -2.13
RNU6-1133P-201ENST00000410963 NCBP3Q53F19 620 aaKnown RBP1.72□□□□□ -2.13
RNU6-1133P-201ENST00000410963 SPNS2Q8IVW8 549 aa1.7□□□□□ -2.14
RNU6-1133P-201ENST00000410963 CDAN1Q8IWY9 1227 aa1.7□□□□□ -2.14
RNU6-1133P-201ENST00000410963 ZNF579Q8NAF0 562 aaKnown RBP1.7□□□□□ -2.14
RNU6-1133P-201ENST00000410963 OSCARQ8IYS5 282 aa1.69□□□□□ -2.14
RNU6-1133P-201ENST00000410963 DCBLD2Q96PD2 775 aa1.69□□□□□ -2.14
RNU6-1133P-201ENST00000410963 MAMSTRQ6ZN01 415 aa1.68□□□□□ -2.14
RNU6-1133P-201ENST00000410963 SPDYE1Q8NFV5 336 aaPredicted RBP1.67□□□□□ -2.14
RNU6-1133P-201ENST00000410963 SPDYE2BA6NHP3 402 aa1.66□□□□□ -2.14
RNU6-1133P-201ENST00000410963 SPDYE6P0CI01 402 aa1.66□□□□□ -2.14
RNU6-1133P-201ENST00000410963 CD44P16070 742 aaKnown RBP1.66□□□□□ -2.14
RNU6-1133P-201ENST00000410963 SPDYE2Q495Y8 402 aa1.66□□□□□ -2.14
RNU6-1133P-201ENST00000410963 PELP1Q8IZL8 1130 aaKnown RBP1.66□□□□□ -2.14
RNU6-1133P-201ENST00000410963 ASTLQ6HA08 431 aaPredicted RBP1.65□□□□□ -2.15
RNU6-1133P-201ENST00000410963 FAM163AQ96GL9 167 aaPredicted RBP1.65□□□□□ -2.15
RNU6-1133P-201ENST00000410963 GALR2O43603 387 aaPredicted RBP1.64□□□□□ -2.15
RNU6-1133P-201ENST00000410963 C7P10643 843 aa1.64□□□□□ -2.15
RNU6-1133P-201ENST00000410963 SSUH2Q9Y2M2 353 aa1.63□□□□□ -2.15
RNU6-1133P-201ENST00000410963 CHADLQ6NUI6 762 aa1.62□□□□□ -2.15
RNU6-1133P-201ENST00000410963 SLC39A7Q92504 469 aa1.62□□□□□ -2.15
RNU6-1133P-201ENST00000410963 SCUBE2Q9NQ36 999 aa1.62□□□□□ -2.15
RNU6-1133P-201ENST00000410963 METRNQ9UJH8 293 aa1.62□□□□□ -2.15
RNU6-1133P-201ENST00000410963 FARP1Q9Y4F1 1045 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1133P-201ENST00000410963 POTEFA5A3E0 1075 aa1.61□□□□□ -2.15
RNU6-1133P-201ENST00000410963 TMEM121BQ9BXQ6 578 aaPredicted RBP1.61□□□□□ -2.15
RNU6-1133P-201ENST00000410963 ATMINO43313 823 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1133P-201ENST00000410963 ST18O60284 1047 aa1.6□□□□□ -2.15
RNU6-1133P-201ENST00000410963 MYCNP04198 464 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1133P-201ENST00000410963 KRTAP3-3Q9BYR6 98 aa1.59□□□□□ -2.15
RNU6-1133P-201ENST00000410963 KRTAP3-2Q9BYR7 98 aa1.59□□□□□ -2.15
RNU6-1133P-201ENST00000410963 CLEC11AQ9Y240 323 aa1.58□□□□□ -2.16
RNU6-1133P-201ENST00000410963 ZRANB1Q9UGI0 708 aa1.57□□□□□ -2.16
RNU6-1133P-201ENST00000410963 ATF5Q9Y2D1 282 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1133P-201ENST00000410963 PRR29P0C7W0 189 aa1.56□□□□□ -2.16
RNU6-1133P-201ENST00000410963 POTEB3A0JP26 581 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms