Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 VTRNA1-1-201ENST00000363120 99 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR524-201ENST00000385242 87 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 RNU1-78P-201ENST00000391248 165 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR4752-201ENST00000579672 72 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR4464-201ENST00000580818 92 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 U7.6-201ENST00000610841 64 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 AP000553.6-201ENST00000641242 118 ntBASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-3Q9BYR6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR372-201ENST00000362225 67 ntBASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 SNORA62.4-201ENST00000365504 151 ntBASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 SNORD115.2-201ENST00000391126 59 ntBASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 AC002429.1-201ENST00000437672 148 ntBASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR5187-201ENST00000583479 76 ntBASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.75□□□□□ -2.13
KRTAP3-3Q9BYR6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR30B-201ENST00000384850 88 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR548Q-201ENST00000408404 100 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 AL159169.1-201ENST00000421119 127 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 RN7SL330P-201ENST00000469709 307 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 RNU6-732P-201ENST00000516033 103 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 RNU2-27P-201ENST00000516185 142 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR3198-2-201ENST00000577868 80 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP3-3Q9BYR6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 U8.9-201ENST00000365667 134 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 Y_RNA.382-201ENST00000365672 114 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR520D-201ENST00000385002 87 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 RNA5SP67-201ENST00000516422 131 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 AC087499.8-201ENST00000578406 226 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR4284-201ENST00000578924 81 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 AL161756.2-201ENST00000604597 246 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR6716-201ENST00000613413 80 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR6730-201ENST00000622213 67 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR7641-1-201ENST00000627518 61 ntBASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP3-3Q9BYR6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 RNU4-45P-201ENST00000365469 141 ntBASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 RNA5SP283-201ENST00000365604 119 ntBASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 SNORA70C-201ENST00000384538 135 ntBASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-3Q9BYR6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR222-201ENST00000384992 110 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 RNA5SP293-201ENST00000410527 113 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU7-170P-201ENST00000459303 61 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 AC026402.1-201ENST00000513642 170 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU1-29P-201ENST00000606574 126 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR6830-201ENST00000636015 70 ntBASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP3-3Q9BYR6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 SNORA62-201ENST00000365493 153 ntBASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 RNY3P8-201ENST00000411366 126 ntBASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 SNORA70.18-201ENST00000516696 98 ntBASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 AP003355.3-201ENST00000623465 114 ntBASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP3-3Q9BYR6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR18A-201ENST00000362310 71 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 RNU6-805P-201ENST00000365643 106 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 HMGN1P18-201ENST00000457642 277 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 S100A11P2-201ENST00000467589 312 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR3186-201ENST00000577404 85 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR6875-201ENST00000617506 72 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 MIR7153-201ENST00000637758 57 ntBASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP3-3Q9BYR6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP3-3Q9BYR6 SNORD56.3-201ENST00000363507 71 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 290 ms