RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 CHIC1Q5VXU3 224 aa4.35□□□□□ -1.71
RNU1-78P-201ENST00000391248 AEBP2Q6ZN18 517 aaPredicted RBP4.23□□□□□ -1.73
RNU1-78P-201ENST00000391248 PHF23Q9BUL5 403 aaPredicted RBP3.93□□□□□ -1.78
RNU1-78P-201ENST00000391248 EHMT2Q96KQ7 1210 aa3.71□□□□□ -1.82
RNU1-78P-201ENST00000391248 PLPPR3Q6T4P5 718 aa3.64□□□□□ -1.83
RNU1-78P-201ENST00000391248 KCNA4P22459 653 aa3.57□□□□□ -1.84
RNU1-78P-201ENST00000391248 SLC24A1O60721 1099 aa3.54□□□□□ -1.84
RNU1-78P-201ENST00000391248 CSRNP3Q8WYN3 585 aa3.53□□□□□ -1.84
RNU1-78P-201ENST00000391248 ADRA2BP18089 450 aa3.52□□□□□ -1.85
RNU1-78P-201ENST00000391248 SENP3Q9H4L4 574 aaPredicted RBP3.44□□□□□ -1.86
RNU1-78P-201ENST00000391248 SLC4A1APQ9BWU0 796 aaKnown RBP3.43□□□□□ -1.86
RNU1-78P-201ENST00000391248 RTN4Q9NQC3 1192 aaKnown RBP3.41□□□□□ -1.86
RNU1-78P-201ENST00000391248 PPP6R1Q9UPN7 881 aa3.41□□□□□ -1.86
RNU1-78P-201ENST00000391248 AMER1Q5JTC6 1135 aaPredicted RBP3.32□□□□□ -1.88
RNU1-78P-201ENST00000391248 ZBTB22O15209 634 aa3.3□□□□□ -1.88
RNU1-78P-201ENST00000391248 PPP4R3CPQ6ZMV5 832 aa3.3□□□□□ -1.88
RNU1-78P-201ENST00000391248 NPM3O75607 178 aaKnown RBP3.24□□□□□ -1.89
RNU1-78P-201ENST00000391248 FOXD1Q16676 465 aa3.24□□□□□ -1.89
RNU1-78P-201ENST00000391248 NCBP3Q53F19 620 aaKnown RBP3.24□□□□□ -1.89
RNU1-78P-201ENST00000391248 PRKCSHP14314 528 aaPredicted RBP3.22□□□□□ -1.89
RNU1-78P-201ENST00000391248 FKBP8Q14318 412 aa3.15□□□□□ -1.91
RNU1-78P-201ENST00000391248 FOXD4L1Q9NU39 408 aa3.13□□□□□ -1.91
RNU1-78P-201ENST00000391248 CNKSR2Q8WXI2 1034 aa3.1□□□□□ -1.91
RNU1-78P-201ENST00000391248 TAOK2Q9UL54 1235 aa3.1□□□□□ -1.91
RNU1-78P-201ENST00000391248 HAP1P54257 671 aaPredicted RBP3.09□□□□□ -1.91
RNU1-78P-201ENST00000391248 PIAS4Q8N2W9 510 aaPredicted RBP3.09□□□□□ -1.91
RNU1-78P-201ENST00000391248 PLCB2Q00722 1185 aa3.08□□□□□ -1.92
RNU1-78P-201ENST00000391248 TPRNQ4KMQ1 711 aa3.07□□□□□ -1.92
RNU1-78P-201ENST00000391248 BCANQ96GW7 911 aa3.06□□□□□ -1.92
RNU1-78P-201ENST00000391248 MAPK8IP2Q13387 824 aaPredicted RBP3.05□□□□□ -1.92
RNU1-78P-201ENST00000391248 SCAF1Q9H7N4 1312 aaKnown RBP3.02□□□□□ -1.93
RNU1-78P-201ENST00000391248 SLC4A2P04920 1241 aa3.01□□□□□ -1.93
RNU1-78P-201ENST00000391248 VSIG10Q8N0Z9 540 aa3.01□□□□□ -1.93
RNU1-78P-201ENST00000391248 KDM2AQ9Y2K7 1162 aa3.01□□□□□ -1.93
RNU1-78P-201ENST00000391248 TULP1O00294 542 aaPredicted RBP3□□□□□ -1.93
RNU1-78P-201ENST00000391248 DCAF8L2P0C7V8 631 aa3□□□□□ -1.93
RNU1-78P-201ENST00000391248 DAXXQ9UER7 740 aaPredicted RBP3□□□□□ -1.93
RNU1-78P-201ENST00000391248 TIMELESSQ9UNS1 1208 aa3□□□□□ -1.93
RNU1-78P-201ENST00000391248 FBLN2P98095 1184 aa2.99□□□□□ -1.93
RNU1-78P-201ENST00000391248 DNAJC5BQ9UF47 199 aa2.99□□□□□ -1.93
RNU1-78P-201ENST00000391248 ATXN8OSP0DMR3 200 aa2.98□□□□□ -1.93
RNU1-78P-201ENST00000391248 GTF3C3Q9Y5Q9 886 aa2.98□□□□□ -1.93
RNU1-78P-201ENST00000391248 RNF216Q9NWF9 866 aaPredicted RBP2.96□□□□□ -1.94
RNU1-78P-201ENST00000391248 ARXQ96QS3 562 aa2.95□□□□□ -1.94
RNU1-78P-201ENST00000391248 ATF5Q9Y2D1 282 aaPredicted RBP2.95□□□□□ -1.94
RNU1-78P-201ENST00000391248 PAXIP1Q6ZW49 1069 aaPredicted RBP2.94□□□□□ -1.94
RNU1-78P-201ENST00000391248 MYCNP04198 464 aaPredicted RBP2.93□□□□□ -1.94
RNU1-78P-201ENST00000391248 NPM1P06748 294 aaKnown RBP eCLIP2.93□□□□□ -1.94
RNU1-78P-201ENST00000391248 CFAP44Q96MT7 982 aa2.93□□□□□ -1.94
RNU1-78P-201ENST00000391248 PKD2Q13563 968 aa2.92□□□□□ -1.94
RNU1-78P-201ENST00000391248 TSHZ2Q9NRE2 1034 aa2.92□□□□□ -1.94
RNU1-78P-201ENST00000391248 IFNLR1Q8IU57 520 aaPredicted RBP2.91□□□□□ -1.94
RNU1-78P-201ENST00000391248 BBXQ8WY36 941 aaPredicted RBP2.9□□□□□ -1.95
RNU1-78P-201ENST00000391248 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.89□□□□□ -1.95
RNU1-78P-201ENST00000391248 FBXO3Q9UK99 471 aa2.89□□□□□ -1.95
RNU1-78P-201ENST00000391248 HOMEZQ8IX15 550 aa2.88□□□□□ -1.95
RNU1-78P-201ENST00000391248 HOXD11P31277 338 aaPredicted RBP2.87□□□□□ -1.95
RNU1-78P-201ENST00000391248 VASPP50552 380 aaPredicted RBP2.87□□□□□ -1.95
RNU1-78P-201ENST00000391248 TMEM132AQ24JP5 1023 aa2.87□□□□□ -1.95
RNU1-78P-201ENST00000391248 SPRYD3Q8NCJ5 442 aa2.87□□□□□ -1.95
RNU1-78P-201ENST00000391248 SPDYE4A6NLX3 237 aa2.86□□□□□ -1.95
RNU1-78P-201ENST00000391248 SUPT5HO00267 1087 aaKnown RBP2.85□□□□□ -1.95
RNU1-78P-201ENST00000391248 C14orf37Q86TY3 774 aa2.85□□□□□ -1.95
RNU1-78P-201ENST00000391248 ERICH6Q7L0X2 663 aa2.84□□□□□ -1.95
RNU1-78P-201ENST00000391248 ECM2O94769 699 aaPredicted RBP2.83□□□□□ -1.96
RNU1-78P-201ENST00000391248 NBR1Q14596 966 aa2.83□□□□□ -1.96
RNU1-78P-201ENST00000391248 DMRT2Q9Y5R5 561 aa2.82□□□□□ -1.96
RNU1-78P-201ENST00000391248 RGL2O15211 777 aa2.81□□□□□ -1.96
RNU1-78P-201ENST00000391248 KLHL34Q8N239 644 aa2.81□□□□□ -1.96
RNU1-78P-201ENST00000391248 ZNF219Q9P2Y4 722 aaPredicted RBP2.81□□□□□ -1.96
RNU1-78P-201ENST00000391248 CHGAP10645 457 aaKnown RBP2.8□□□□□ -1.96
RNU1-78P-201ENST00000391248 MKRN4PQ13434 485 aaPredicted RBP2.8□□□□□ -1.96
RNU1-78P-201ENST00000391248 PODXL2Q9NZ53 605 aa2.8□□□□□ -1.96
RNU1-78P-201ENST00000391248 PROM2Q8N271 834 aa2.79□□□□□ -1.96
RNU1-78P-201ENST00000391248 SPOCK2Q92563 424 aa2.79□□□□□ -1.96
RNU1-78P-201ENST00000391248 MSH5O43196 834 aa2.78□□□□□ -1.96
RNU1-78P-201ENST00000391248 HRCP23327 699 aa2.78□□□□□ -1.96
RNU1-78P-201ENST00000391248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU1-78P-201ENST00000391248 TRIM26Q12899 539 aaPredicted RBP2.77□□□□□ -1.97
RNU1-78P-201ENST00000391248 DNAJC5Q9H3Z4 198 aa2.77□□□□□ -1.97
RNU1-78P-201ENST00000391248 UBTFP17480 764 aaKnown RBP2.76□□□□□ -1.97
RNU1-78P-201ENST00000391248 SAMD1Q6SPF0 538 aaPredicted RBP2.76□□□□□ -1.97
RNU1-78P-201ENST00000391248 DCAF8L1A6NGE4 600 aa2.75□□□□□ -1.97
RNU1-78P-201ENST00000391248 RANGAP1P46060 587 aaPredicted RBP2.75□□□□□ -1.97
RNU1-78P-201ENST00000391248 U3KPZ7 1027 aaPredicted RBP2.75□□□□□ -1.97
RNU1-78P-201ENST00000391248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.74□□□□□ -1.97
RNU1-78P-201ENST00000391248 TRHP20396 242 aaPredicted RBP2.74□□□□□ -1.97
RNU1-78P-201ENST00000391248 HNRNPUL2Q1KMD3 747 aaKnown RBP2.74□□□□□ -1.97
RNU1-78P-201ENST00000391248 NPM2Q86SE8 214 aaKnown RBP2.74□□□□□ -1.97
RNU1-78P-201ENST00000391248 CIZ1Q9ULV3 898 aaPredicted RBP2.74□□□□□ -1.97
RNU1-78P-201ENST00000391248 BRPF1P55201 1214 aaPredicted RBP2.72□□□□□ -1.97
RNU1-78P-201ENST00000391248 MIER1Q8N108 512 aa2.72□□□□□ -1.97
RNU1-78P-201ENST00000391248 GTPBP6O43824 516 aaPredicted RBP2.71□□□□□ -1.98
RNU1-78P-201ENST00000391248 NKX1-1Q15270 411 aaPredicted RBP2.71□□□□□ -1.98
RNU1-78P-201ENST00000391248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU1-78P-201ENST00000391248 PLCD3Q8N3E9 789 aa2.71□□□□□ -1.98
RNU1-78P-201ENST00000391248 POLA2Q14181 598 aa2.69□□□□□ -1.98
RNU1-78P-201ENST00000391248 NEUROD2Q15784 382 aa2.68□□□□□ -1.98
RNU1-78P-201ENST00000391248 HS6ST3Q8IZP7 471 aa2.68□□□□□ -1.98
RNU1-78P-201ENST00000391248 ARID3AQ99856 593 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms