RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 DCAF8L2P0C7V8 631 aa6.78□□□□□ -1.32
NCOA1-203ENST00000395856 EHMT2Q96KQ7 1210 aa6.63□□□□□ -1.35
NCOA1-203ENST00000395856 PELP1Q8IZL8 1130 aaKnown RBP6.52□□□□□ -1.37
NCOA1-203ENST00000395856 SUPT5HO00267 1087 aaKnown RBP6.47□□□□□ -1.37
NCOA1-203ENST00000395856 ERICH6Q7L0X2 663 aa6.46□□□□□ -1.38
NCOA1-203ENST00000395856 MYT1Q01538 1121 aa6.41□□□□□ -1.38
NCOA1-203ENST00000395856 TTBK1Q5TCY1 1321 aaPredicted RBP6.41□□□□□ -1.38
NCOA1-203ENST00000395856 SHROOM4Q9ULL8 1493 aa6.32□□□□□ -1.4
NCOA1-203ENST00000395856 FAM9AQ8IZU1 332 aaPredicted RBP6.28□□□□□ -1.4
NCOA1-203ENST00000395856 YTHDC1Q96MU7 727 aaKnown RBP6.27□□□□□ -1.41
NCOA1-203ENST00000395856 PCGF6Q9BYE7 350 aa6.23□□□□□ -1.41
NCOA1-203ENST00000395856 CCER1Q8TC90 406 aaPredicted RBP6.23□□□□□ -1.41
NCOA1-203ENST00000395856 RANGAP1P46060 587 aaPredicted RBP6.22□□□□□ -1.41
NCOA1-203ENST00000395856 APLP2Q06481 763 aa6.2□□□□□ -1.42
NCOA1-203ENST00000395856 CENPBP07199 599 aaPredicted RBP6.19□□□□□ -1.42
NCOA1-203ENST00000395856 NEFLP07196 543 aa6.11□□□□□ -1.43
NCOA1-203ENST00000395856 ATP1B4Q9UN42 357 aaPredicted RBP6.11□□□□□ -1.43
NCOA1-203ENST00000395856 PPARGC1BQ86YN6 1023 aaKnown RBP6.05□□□□□ -1.44
NCOA1-203ENST00000395856 CNGB1Q14028 1251 aaPredicted RBP6.05□□□□□ -1.44
NCOA1-203ENST00000395856 DAXXQ9UER7 740 aaPredicted RBP6.04□□□□□ -1.44
NCOA1-203ENST00000395856 POLR3GLQ9BT43 218 aa6.01□□□□□ -1.45
NCOA1-203ENST00000395856 MYT1LQ9UL68 1186 aa5.99□□□□□ -1.45
NCOA1-203ENST00000395856 AEBP2Q6ZN18 517 aaPredicted RBP5.99□□□□□ -1.45
NCOA1-203ENST00000395856 ZEB1P37275 1124 aaPredicted RBP5.96□□□□□ -1.46
NCOA1-203ENST00000395856 CHIC1Q5VXU3 224 aa5.93□□□□□ -1.46
NCOA1-203ENST00000395856 ZNF316A6NFI3 1004 aaPredicted RBP5.93□□□□□ -1.46
NCOA1-203ENST00000395856 RTL5Q5HYW3 569 aaPredicted RBP5.91□□□□□ -1.46
NCOA1-203ENST00000395856 ITGAEP38570 1179 aa5.9□□□□□ -1.47
NCOA1-203ENST00000395856 UBTFP17480 764 aaKnown RBP5.89□□□□□ -1.47
NCOA1-203ENST00000395856 BCANQ96GW7 911 aa5.89□□□□□ -1.47
NCOA1-203ENST00000395856 SLC4A1APQ9BWU0 796 aaKnown RBP5.88□□□□□ -1.47
NCOA1-203ENST00000395856 CLSPNQ9HAW4 1339 aa5.87□□□□□ -1.47
NCOA1-203ENST00000395856 TRIM41Q8WV44 630 aa5.86□□□□□ -1.47
NCOA1-203ENST00000395856 BCL11AQ9H165 835 aa5.86□□□□□ -1.47
NCOA1-203ENST00000395856 HRCP23327 699 aa5.82□□□□□ -1.48
NCOA1-203ENST00000395856 EIF5BO60841 1220 aaKnown RBP5.78□□□□□ -1.48
NCOA1-203ENST00000395856 HNRNPUL2Q1KMD3 747 aaKnown RBP5.78□□□□□ -1.48
NCOA1-203ENST00000395856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.77□□□□□ -1.49
NCOA1-203ENST00000395856 PLPPR3Q6T4P5 718 aa5.75□□□□□ -1.49
NCOA1-203ENST00000395856 TRIM26Q12899 539 aaPredicted RBP5.74□□□□□ -1.49
NCOA1-203ENST00000395856 GTF3C3Q9Y5Q9 886 aa5.74□□□□□ -1.49
NCOA1-203ENST00000395856 NPM2Q86SE8 214 aaKnown RBP5.74□□□□□ -1.49
NCOA1-203ENST00000395856 SLC24A1O60721 1099 aa5.73□□□□□ -1.49
NCOA1-203ENST00000395856 DIEXFQ68CQ4 756 aaKnown RBP5.72□□□□□ -1.49
NCOA1-203ENST00000395856 DCAF8L1A6NGE4 600 aa5.7□□□□□ -1.5
NCOA1-203ENST00000395856 ARXQ96QS3 562 aa5.7□□□□□ -1.5
NCOA1-203ENST00000395856 LOC105371045A0A1W2PR82 267 aa5.69□□□□□ -1.5
NCOA1-203ENST00000395856 CDK11AQ9UQ88 783 aaPredicted RBP5.69□□□□□ -1.5
NCOA1-203ENST00000395856 NEUROD1Q13562 356 aa5.68□□□□□ -1.5
NCOA1-203ENST00000395856 CANXP27824 592 aaKnown RBP5.67□□□□□ -1.5
NCOA1-203ENST00000395856 NISCHQ9Y2I1 1504 aa5.66□□□□□ -1.5
NCOA1-203ENST00000395856 ZNF326Q5BKZ1 582 aaKnown RBP5.66□□□□□ -1.5
NCOA1-203ENST00000395856 ZBTB47Q9UFB7 747 aaPredicted RBP5.66□□□□□ -1.5
NCOA1-203ENST00000395856 TRHP20396 242 aaPredicted RBP5.65□□□□□ -1.5
NCOA1-203ENST00000395856 NBR1Q14596 966 aa5.65□□□□□ -1.51
NCOA1-203ENST00000395856 ESF1Q9H501 851 aaKnown RBP5.64□□□□□ -1.51
NCOA1-203ENST00000395856 FAM50AQ14320 339 aaKnown RBP5.63□□□□□ -1.51
NCOA1-203ENST00000395856 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
NCOA1-203ENST00000395856 ANP32AP39687 249 aaKnown RBP5.61□□□□□ -1.51
NCOA1-203ENST00000395856 SCAF1Q9H7N4 1312 aaKnown RBP5.61□□□□□ -1.51
NCOA1-203ENST00000395856 ANP32CO43423 234 aa5.59□□□□□ -1.52
NCOA1-203ENST00000395856 GLIPR1L2Q4G1C9 344 aa5.58□□□□□ -1.52
NCOA1-203ENST00000395856 PHF23Q9BUL5 403 aaPredicted RBP5.57□□□□□ -1.52
NCOA1-203ENST00000395856 ANP32BQ92688 251 aaKnown RBP5.57□□□□□ -1.52
NCOA1-203ENST00000395856 AMER1Q5JTC6 1135 aaPredicted RBP5.57□□□□□ -1.52
NCOA1-203ENST00000395856 HSP90AA1P07900 732 aaKnown RBP5.56□□□□□ -1.52
NCOA1-203ENST00000395856 A0A0G2JS52 829 aa5.56□□□□□ -1.52
NCOA1-203ENST00000395856 FKBP8Q14318 412 aa5.55□□□□□ -1.52
NCOA1-203ENST00000395856 SALL2Q9Y467 1007 aaPredicted RBP5.54□□□□□ -1.52
NCOA1-203ENST00000395856 TPRNQ4KMQ1 711 aa5.54□□□□□ -1.52
NCOA1-203ENST00000395856 ACIN1Q9UKV3 1341 aaKnown RBP5.53□□□□□ -1.52
NCOA1-203ENST00000395856 FBLN2P98095 1184 aa5.52□□□□□ -1.53
NCOA1-203ENST00000395856 FOXD1Q16676 465 aa5.52□□□□□ -1.53
NCOA1-203ENST00000395856 RTN4Q9NQC3 1192 aaKnown RBP5.52□□□□□ -1.53
NCOA1-203ENST00000395856 SENP3Q9H4L4 574 aaPredicted RBP5.51□□□□□ -1.53
NCOA1-203ENST00000395856 IRX6P78412 446 aaPredicted RBP5.51□□□□□ -1.53
NCOA1-203ENST00000395856 NPM1P06748 294 aaKnown RBP eCLIP5.51□□□□□ -1.53
NCOA1-203ENST00000395856 ARID3CA6NKF2 412 aa5.51□□□□□ -1.53
NCOA1-203ENST00000395856 TULP1O00294 542 aaPredicted RBP5.5□□□□□ -1.53
NCOA1-203ENST00000395856 NEFMP07197 916 aa5.48□□□□□ -1.53
NCOA1-203ENST00000395856 FAM9BQ8IZU0 186 aa5.47□□□□□ -1.53
NCOA1-203ENST00000395856 SENP3-EIF4A1A0A087X0R7 540 aa5.46□□□□□ -1.54
NCOA1-203ENST00000395856 UPF2Q9HAU5 1272 aaKnown RBP5.45□□□□□ -1.54
NCOA1-203ENST00000395856 PLEKHG5O94827 1062 aa5.45□□□□□ -1.54
NCOA1-203ENST00000395856 TAOK2Q9UL54 1235 aa5.45□□□□□ -1.54
NCOA1-203ENST00000395856 CDK11BP21127 795 aaKnown RBP5.44□□□□□ -1.54
NCOA1-203ENST00000395856 HNRNPUQ00839 825 aaKnown RBP eCLIP5.44□□□□□ -1.54
NCOA1-203ENST00000395856 NCLP19338 710 aaKnown RBP5.44□□□□□ -1.54
NCOA1-203ENST00000395856 HAP1P54257 671 aaPredicted RBP5.44□□□□□ -1.54
NCOA1-203ENST00000395856 NAP1L5Q96NT1 182 aaPredicted RBP5.43□□□□□ -1.54
NCOA1-203ENST00000395856 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
NCOA1-203ENST00000395856 ARID4BQ4LE39 1312 aaPredicted RBP5.43□□□□□ -1.54
NCOA1-203ENST00000395856 P3H3Q8IVL6 736 aa5.42□□□□□ -1.54
NCOA1-203ENST00000395856 CCDC136Q96JN2 1154 aa5.41□□□□□ -1.54
NCOA1-203ENST00000395856 NCBP3Q53F19 620 aaKnown RBP5.41□□□□□ -1.54
NCOA1-203ENST00000395856 TRIM44Q96DX7 344 aaPredicted RBP5.41□□□□□ -1.54
NCOA1-203ENST00000395856 ZNF777Q9ULD5 760 aaPredicted RBP5.41□□□□□ -1.54
NCOA1-203ENST00000395856 DNTTIP2Q5QJE6 756 aaKnown RBP5.4□□□□□ -1.54
NCOA1-203ENST00000395856 ARID3AQ99856 593 aa5.4□□□□□ -1.54
NCOA1-203ENST00000395856 CHGAP10645 457 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms