Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 AL592293.1-201ENST00000502889 1188 ntBASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 AL157400.5-201ENST00000507624 621 ntBASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 DUX4L28-201ENST00000623687 678 ntBASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 AC055733.4-201ENST00000638462 1354 ntBASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 LINC00602-201ENST00000629776 2065 ntBASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 DPP3P2-201ENST00000416030 1696 ntBASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC01558Q9Y6Z2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 AC022188.1-201ENST00000620960 1664 ntBASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
LINC01558Q9Y6Z2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC9.77□□□□□ -0.85
LINC01558Q9Y6Z2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms