Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 AC006333.2-201ENST00000607957 2099 ntBASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 AC120498.8-201ENST00000614275 531 ntBASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 POM121L13P-201ENST00000422362 380 ntBASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
R3HCC1Q9Y3T6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
R3HCC1Q9Y3T6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
R3HCC1Q9Y3T6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.52■■□□□ 1.03
R3HCC1Q9Y3T6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3HCC1Q9Y3T6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 AL139384.1-201ENST00000612143 3047 ntBASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms