Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF6Q9Y252 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF6Q9Y252 AC141586.3-201ENST00000562166 1838 ntBASIC17.77■□□□□ 0.43
RNF6Q9Y252 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF6Q9Y252 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF6Q9Y252 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF6Q9Y252 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RNF6Q9Y252 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF6Q9Y252 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF6Q9Y252 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF6Q9Y252 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 WIZP1-201ENST00000531444 2299 ntBASIC17.76■□□□□ 0.43
RNF6Q9Y252 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF6Q9Y252 AL353807.1-201ENST00000427475 662 ntBASIC17.76■□□□□ 0.43
RNF6Q9Y252 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF6Q9Y252 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF6Q9Y252 CD177P1-201ENST00000606252 935 ntBASIC17.76■□□□□ 0.43
RNF6Q9Y252 AC012306.2-201ENST00000609350 630 ntBASIC17.76■□□□□ 0.43
RNF6Q9Y252 AC090164.3-201ENST00000610780 2143 ntBASIC17.76■□□□□ 0.43
RNF6Q9Y252 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF6Q9Y252 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF6Q9Y252 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AL121906.2-201ENST00000621597 723 ntBASIC17.75■□□□□ 0.43
RNF6Q9Y252 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF6Q9Y252 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF6Q9Y252 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 PCDHB18P-201ENST00000524813 2368 ntBASIC17.74■□□□□ 0.43
RNF6Q9Y252 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 FAM197Y1-201ENST00000421178 764 ntBASIC17.74■□□□□ 0.43
RNF6Q9Y252 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 AL353708.3-201ENST00000610272 989 ntBASIC17.74■□□□□ 0.43
RNF6Q9Y252 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF6Q9Y252 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms