Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AC016769.1-201ENST00000409132 1010 ntBASIC16.06■□□□□ 0.16
COMMD9Q9P000 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD9Q9P000 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 AC069236.1-201ENST00000604339 616 ntBASIC16.06■□□□□ 0.16
COMMD9Q9P000 MIR6821-201ENST00000617625 74 ntBASIC16.06■□□□□ 0.16
COMMD9Q9P000 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD9Q9P000 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.06■□□□□ 0.16
COMMD9Q9P000 AC067852.2-201ENST00000590513 2313 ntBASIC16.06■□□□□ 0.16
COMMD9Q9P000 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD9Q9P000 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 AC068338.2-201ENST00000563278 1430 ntBASIC16.05■□□□□ 0.16
COMMD9Q9P000 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 FP475955.4-201ENST00000623131 1990 ntBASIC16.05■□□□□ 0.16
COMMD9Q9P000 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 AC139713.2-201ENST00000641328 2723 ntBASIC16.05■□□□□ 0.16
COMMD9Q9P000 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COMMD9Q9P000 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD9Q9P000 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 CNN2P6-201ENST00000439038 900 ntBASIC16.04■□□□□ 0.16
COMMD9Q9P000 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 CYP2T3P-201ENST00000601990 817 ntBASIC16.04■□□□□ 0.16
COMMD9Q9P000 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.04■□□□□ 0.16
COMMD9Q9P000 AC008694.1-202ENST00000636953 945 ntBASIC16.04■□□□□ 0.16
COMMD9Q9P000 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COMMD9Q9P000 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD9Q9P000 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 TEX21P-204ENST00000641479 1693 ntBASIC16.03■□□□□ 0.16
COMMD9Q9P000 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 CYP2T1P-201ENST00000432607 1285 ntBASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC023632.3-201ENST00000521633 145 ntBASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 DUX4L16-201ENST00000555130 1264 ntBASIC16.03■□□□□ 0.16
COMMD9Q9P000 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms