Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 AL355075.4-201ENST00000554988 638 ntBASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 AP000525.1-201ENST00000608286 694 ntBASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 AL512353.2-201ENST00000448759 1962 ntBASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 KRT8P32-201ENST00000512863 1461 ntBASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 AC079598.2-202ENST00000546624 1451 ntBASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 FITM1-202ENST00000559294 800 ntBASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 AC093525.10-201ENST00000625130 1569 ntBASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.34■□□□□ 0.37
UBQLN4Q9NRR5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 AC093503.3-201ENST00000624917 2352 ntBASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN4Q9NRR5 AC004408.2-201ENST00000623613 2777 ntBASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 Z98044.1-201ENST00000632503 1764 ntBASIC17.33■□□□□ 0.36
UBQLN4Q9NRR5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 HEIH-201ENST00000623091 1652 ntBASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 MIR1238-201ENST00000408483 83 ntBASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 AL596275.1-201ENST00000423464 877 ntBASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN4Q9NRR5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms