Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 AC126763.1-201ENST00000552015 2118 ntBASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 AL162741.1-201ENST00000565563 1558 ntBASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 PPP1R14BP3-201ENST00000509033 445 ntBASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 PRKY-204ENST00000533551 1019 ntBASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13□□□□□ -0.33
CDC42SE2Q9NRR3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE2Q9NRR3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE2Q9NRR3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms