Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 AL109659.2-201ENST00000606809 1674 ntBASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 IGHGP-201ENST00000390555 1178 ntBASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 AC092183.1-201ENST00000469884 875 ntBASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 RN7SL606P-201ENST00000472779 293 ntBASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFYVE28Q9HCC9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 AL031284.1-201ENST00000419297 478 ntBASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFYVE28Q9HCC9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.52■■□□□ 1.03
ZFYVE28Q9HCC9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZFYVE28Q9HCC9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 AC093909.1-201ENST00000504731 1122 ntBASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE28Q9HCC9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 AL512408.1-201ENST00000569378 2000 ntBASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 KRT18P67-201ENST00000432816 1264 ntBASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 MINOS1P3-201ENST00000457048 203 ntBASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 AF186996.4-201ENST00000467186 377 ntBASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 RNPS1P1-201ENST00000507437 918 ntBASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms