Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 HLA-A-209ENST00000638375 975 ntBASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 AL031985.4-201ENST00000642138 673 ntBASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.34■□□□□ 0.53
CLK4Q9HAZ1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLK4Q9HAZ1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 CD177P1-201ENST00000606252 935 ntBASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLK4Q9HAZ1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 AIRN-201ENST00000601203 4374 ntBASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 AL160286.2-201ENST00000567150 934 ntBASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 AC113410.3-201ENST00000623366 203 ntBASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLK4Q9HAZ1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.31■□□□□ 0.52
CLK4Q9HAZ1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms