Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 AD000864.1-201ENST00000624076 2295 ntBASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNF1Q9H3M0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 AC010980.2-201ENST00000587099 1412 ntBASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNF1Q9H3M0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNF1Q9H3M0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 YBX1P10-201ENST00000444752 975 ntBASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNF1Q9H3M0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNF1Q9H3M0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNF1Q9H3M0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNF1Q9H3M0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.52■□□□□ 0.87
KCNF1Q9H3M0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms