Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 AC145285.6-201ENST00000604632 637 ntBASIC17.48■□□□□ 0.39
UBQLN3Q9H347 AC010947.1-201ENST00000623454 693 ntBASIC17.48■□□□□ 0.39
UBQLN3Q9H347 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN3Q9H347 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 NAPSB-206ENST00000562112 1266 ntBASIC17.46■□□□□ 0.39
UBQLN3Q9H347 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN3Q9H347 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
UBQLN3Q9H347 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBQLN3Q9H347 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SDHAP1-207ENST00000440850 2000 ntBASIC17.45■□□□□ 0.38
UBQLN3Q9H347 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 CRYGFP-201ENST00000418459 633 ntBASIC17.45■□□□□ 0.38
UBQLN3Q9H347 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SLC25A1P4-201ENST00000567977 778 ntBASIC17.45■□□□□ 0.38
UBQLN3Q9H347 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN3Q9H347 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms