Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VCX3BQ9H321 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCX3BQ9H321 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.96■□□□□ 0.47
VCX3BQ9H321 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
VCX3BQ9H321 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VCX3BQ9H321 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VCX3BQ9H321 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 SLC7A5P2-201ENST00000553010 536 ntBASIC17.95■□□□□ 0.46
VCX3BQ9H321 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 RBM17P2-201ENST00000616397 1405 ntBASIC17.95■□□□□ 0.46
VCX3BQ9H321 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.95■□□□□ 0.46
VCX3BQ9H321 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3BQ9H321 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.95■□□□□ 0.46
VCX3BQ9H321 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.94■□□□□ 0.46
VCX3BQ9H321 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.94■□□□□ 0.46
VCX3BQ9H321 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.94■□□□□ 0.46
VCX3BQ9H321 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3BQ9H321 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VCX3BQ9H321 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms