Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.42■□□□□ 0.86
CDT1Q9H211 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.42■□□□□ 0.86
CDT1Q9H211 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.42■□□□□ 0.86
CDT1Q9H211 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.42■□□□□ 0.86
CDT1Q9H211 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.42■□□□□ 0.86
CDT1Q9H211 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CDT1Q9H211 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
CDT1Q9H211 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CDT1Q9H211 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDT1Q9H211 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.42■□□□□ 0.86
CDT1Q9H211 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.42■□□□□ 0.86
CDT1Q9H211 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDT1Q9H211 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDT1Q9H211 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDT1Q9H211 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.41■□□□□ 0.86
CDT1Q9H211 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDT1Q9H211 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDT1Q9H211 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CDT1Q9H211 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDT1Q9H211 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.41■□□□□ 0.86
CDT1Q9H211 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDT1Q9H211 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDT1Q9H211 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.41■□□□□ 0.86
CDT1Q9H211 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDT1Q9H211 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CDT1Q9H211 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.4■□□□□ 0.86
CDT1Q9H211 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.4■□□□□ 0.86
CDT1Q9H211 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.4■□□□□ 0.86
CDT1Q9H211 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.4■□□□□ 0.86
CDT1Q9H211 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.4■□□□□ 0.86
CDT1Q9H211 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.4■□□□□ 0.86
CDT1Q9H211 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.4■□□□□ 0.86
CDT1Q9H211 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDT1Q9H211 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.4■□□□□ 0.86
CDT1Q9H211 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CDT1Q9H211 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDT1Q9H211 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDT1Q9H211 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDT1Q9H211 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CDT1Q9H211 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDT1Q9H211 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDT1Q9H211 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDT1Q9H211 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDT1Q9H211 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.39■□□□□ 0.86
CDT1Q9H211 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.39■□□□□ 0.86
CDT1Q9H211 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.39■□□□□ 0.85
CDT1Q9H211 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.39■□□□□ 0.85
CDT1Q9H211 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 MIR564-202ENST00000385049 94 ntBASIC20.39■□□□□ 0.85
CDT1Q9H211 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.39■□□□□ 0.85
CDT1Q9H211 KRT18P38-201ENST00000449496 1282 ntBASIC20.39■□□□□ 0.85
CDT1Q9H211 AC092647.4-201ENST00000457211 535 ntBASIC20.39■□□□□ 0.85
CDT1Q9H211 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.39■□□□□ 0.85
CDT1Q9H211 MYC-208ENST00000641036 567 ntBASIC20.39■□□□□ 0.85
CDT1Q9H211 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDT1Q9H211 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDT1Q9H211 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CDT1Q9H211 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDT1Q9H211 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDT1Q9H211 HEIH-201ENST00000623091 1652 ntBASIC20.38■□□□□ 0.85
CDT1Q9H211 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms