Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
CYSTM1Q9H1C7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.96□□□□□ -0.66
CYSTM1Q9H1C7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC10.96□□□□□ -0.66
CYSTM1Q9H1C7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
CYSTM1Q9H1C7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CYSTM1Q9H1C7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 ANO7L1-203ENST00000602586 1720 ntBASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 AP002414.2-201ENST00000591780 3365 ntBASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 TEX21P-204ENST00000641479 1693 ntBASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
CYSTM1Q9H1C7 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CYSTM1Q9H1C7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 AC141586.3-201ENST00000562166 1838 ntBASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms