Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.27■□□□□ 0.04
NKX6-2Q9C056 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 AC007322.3-201ENST00000426526 701 ntBASIC15.27■□□□□ 0.04
NKX6-2Q9C056 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX6-2Q9C056 AC022211.2-201ENST00000585075 2527 ntBASIC15.27■□□□□ 0.03
NKX6-2Q9C056 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NKX6-2Q9C056 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.26■□□□□ 0.03
NKX6-2Q9C056 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 AL162741.1-201ENST00000565563 1558 ntBASIC15.26■□□□□ 0.03
NKX6-2Q9C056 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 FLJ38576-201ENST00000623820 2459 ntBASIC15.26■□□□□ 0.03
NKX6-2Q9C056 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-2Q9C056 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms