Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 KSR1P1-201ENST00000446298 240 ntBASIC17.36■□□□□ 0.37
TRIM2Q9C040 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM2Q9C040 AL512353.2-201ENST00000448759 1962 ntBASIC17.36■□□□□ 0.37
TRIM2Q9C040 HTR7P1-201ENST00000538670 1336 ntBASIC17.36■□□□□ 0.37
TRIM2Q9C040 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM2Q9C040 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM2Q9C040 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM2Q9C040 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 AC004980.1-204ENST00000429707 299 ntBASIC17.34■□□□□ 0.37
TRIM2Q9C040 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.34■□□□□ 0.37
TRIM2Q9C040 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 Z99916.2-201ENST00000604037 246 ntBASIC17.34■□□□□ 0.37
TRIM2Q9C040 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms