Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 OR2A1-AS1-204ENST00000470435 602 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SLC7A5P2-201ENST00000553010 536 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L2-201ENST00000561772 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CCDC92B-201ENST00000575506 885 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC008764.7-201ENST00000593779 1081 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L6-201ENST00000626483 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L1-201ENST00000627662 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L8-201ENST00000629013 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L3-201ENST00000630187 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L7-201ENST00000630678 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 DUX4L5-201ENST00000630834 1275 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC106820.2-201ENST00000563775 3264 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
LCE3DQ9BYE3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms