Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL022342.1-201ENST00000400363 863 ntBASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 AC023511.2-201ENST00000618803 211 ntBASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 AL512353.2-201ENST00000448759 1962 ntBASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RTFDC1Q9BY42 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.89■■□□□ 1.26
RTFDC1Q9BY42 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 LINC01711-201ENST00000598340 967 ntBASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 AC008556.1-201ENST00000610908 2040 ntBASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RTFDC1Q9BY42 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 RCC2P3-201ENST00000418112 1537 ntBASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 AC104819.1-201ENST00000504587 486 ntBASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 TREX1-205ENST00000625293 1783 ntBASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 AC233702.3-201ENST00000578656 1387 ntBASIC22.88■■□□□ 1.25
RTFDC1Q9BY42 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 AC125437.2-201ENST00000625180 2167 ntBASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms