Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 UNC93B5-201ENST00000530315 699 ntBASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHANK2-AS3Q9BTD1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 HEIH-201ENST00000623091 1652 ntBASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 KRT8P41-201ENST00000533985 1514 ntBASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 NOC2LP1-202ENST00000452600 2235 ntBASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.52□□□□□ -0.08
SHANK2-AS3Q9BTD1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 AC026471.1-201ENST00000564629 3026 ntBASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHANK2-AS3Q9BTD1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 AC126763.1-201ENST00000552015 2118 ntBASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHANK2-AS3Q9BTD1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms