Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 AC091390.4-202ENST00000476426 537 ntBASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 Z85996.1-201ENST00000494644 937 ntBASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AC008040.2-201ENST00000461049 708 ntBASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AP000692.2-201ENST00000608391 879 ntBASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AC093484.2-201ENST00000580996 2166 ntBASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCGF1Q9BSM1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 AC005332.7-201ENST00000614046 2005 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 KRT18P22-201ENST00000402024 1347 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 MFAP1P1-201ENST00000442257 1255 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 FAM210CP-201ENST00000445714 574 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 AP005242.2-201ENST00000580065 1175 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 AC145285.6-201ENST00000604632 637 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 AC010947.1-201ENST00000623454 693 ntBASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms