Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 AC131274.2-201ENST00000580697 1507 ntBASIC13.18□□□□□ -0.3
VPS25Q9BRG1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 AL592295.1-201ENST00000400984 884 ntBASIC13.17□□□□□ -0.3
VPS25Q9BRG1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 AC060814.1-201ENST00000554326 538 ntBASIC13.17□□□□□ -0.3
VPS25Q9BRG1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS25Q9BRG1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS25Q9BRG1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms