Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX18Q96RF0 AP006294.2-201ENST00000641667 209 ntBASIC17.16■□□□□ 0.34
SNX18Q96RF0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SNX18Q96RF0 HCG11-201ENST00000411553 5696 ntBASIC17.16■□□□□ 0.34
SNX18Q96RF0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX18Q96RF0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX18Q96RF0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX18Q96RF0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 PRKY-204ENST00000533551 1019 ntBASIC17.15■□□□□ 0.34
SNX18Q96RF0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX18Q96RF0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SNX18Q96RF0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNX18Q96RF0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNX18Q96RF0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.14■□□□□ 0.34
SNX18Q96RF0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNX18Q96RF0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 AC093525.10-201ENST00000625130 1569 ntBASIC17.14■□□□□ 0.33
SNX18Q96RF0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX18Q96RF0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SNX18Q96RF0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 AC006333.2-201ENST00000607957 2099 ntBASIC17.13■□□□□ 0.33
SNX18Q96RF0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms