Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.83■□□□□ 0.44
COL21A1Q96P44 FP475955.4-201ENST00000623131 1990 ntBASIC17.83■□□□□ 0.44
COL21A1Q96P44 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL21A1Q96P44 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.83■□□□□ 0.44
COL21A1Q96P44 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.83■□□□□ 0.44
COL21A1Q96P44 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.83■□□□□ 0.44
COL21A1Q96P44 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL21A1Q96P44 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL21A1Q96P44 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COL21A1Q96P44 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL21A1Q96P44 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 KRT16P1-201ENST00000399124 1418 ntBASIC17.82■□□□□ 0.44
COL21A1Q96P44 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.82■□□□□ 0.44
COL21A1Q96P44 RPS2P4-201ENST00000476944 856 ntBASIC17.82■□□□□ 0.44
COL21A1Q96P44 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 AL049637.2-201ENST00000641778 930 ntBASIC17.82■□□□□ 0.44
COL21A1Q96P44 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.82■□□□□ 0.44
COL21A1Q96P44 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL21A1Q96P44 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 AC131212.4-201ENST00000623606 975 ntBASIC17.81■□□□□ 0.44
COL21A1Q96P44 CR392000.1-201ENST00000624770 1228 ntBASIC17.81■□□□□ 0.44
COL21A1Q96P44 AC066615.1-201ENST00000640911 628 ntBASIC17.81■□□□□ 0.44
COL21A1Q96P44 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.81■□□□□ 0.44
COL21A1Q96P44 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL21A1Q96P44 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 FAM197Y1-201ENST00000421178 764 ntBASIC17.8■□□□□ 0.44
COL21A1Q96P44 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms