Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00477Q96M19 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
LINC00477Q96M19 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00477Q96M19 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00477Q96M19 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00477Q96M19 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00477Q96M19 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00477Q96M19 AC005082.1-201ENST00000413042 2259 ntBASIC14.15□□□□□ -0.14
LINC00477Q96M19 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00477Q96M19 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.15□□□□□ -0.15
LINC00477Q96M19 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
LINC00477Q96M19 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 AC135050.7-201ENST00000624508 2218 ntBASIC14.14□□□□□ -0.15
LINC00477Q96M19 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00477Q96M19 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00477Q96M19 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 AC104581.1-202ENST00000635932 2618 ntBASIC14.13□□□□□ -0.15
LINC00477Q96M19 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00477Q96M19 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00477Q96M19 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00477Q96M19 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC00477Q96M19 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00477Q96M19 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00477Q96M19 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00477Q96M19 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00477Q96M19 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms