Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF25Q96BH1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF25Q96BH1 AC093525.10-201ENST00000625130 1569 ntBASIC19.83■□□□□ 0.76
RNF25Q96BH1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF25Q96BH1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 AC090164.3-201ENST00000610780 2143 ntBASIC19.82■□□□□ 0.76
RNF25Q96BH1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 AL133373.2-201ENST00000623187 2828 ntBASIC19.82■□□□□ 0.76
RNF25Q96BH1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 MIR4651-201ENST00000582622 73 ntBASIC19.82■□□□□ 0.76
RNF25Q96BH1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 Z98044.1-201ENST00000632503 1764 ntBASIC19.82■□□□□ 0.76
RNF25Q96BH1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RNF25Q96BH1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF25Q96BH1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 AC010740.1-201ENST00000417035 684 ntBASIC19.81■□□□□ 0.76
RNF25Q96BH1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 AC110285.5-201ENST00000611501 352 ntBASIC19.81■□□□□ 0.76
RNF25Q96BH1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 AC138932.1-201ENST00000534164 6830 ntBASIC19.81■□□□□ 0.76
RNF25Q96BH1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF25Q96BH1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF25Q96BH1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 AC079598.2-202ENST00000546624 1451 ntBASIC19.8■□□□□ 0.76
RNF25Q96BH1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 AC133681.1-201ENST00000465482 601 ntBASIC19.8■□□□□ 0.76
RNF25Q96BH1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF25Q96BH1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF25Q96BH1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
RNF25Q96BH1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF25Q96BH1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF25Q96BH1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF25Q96BH1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF25Q96BH1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF25Q96BH1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF25Q96BH1 AC128676.1-201ENST00000454392 318 ntBASIC19.79■□□□□ 0.76
RNF25Q96BH1 Z85996.1-201ENST00000494644 937 ntBASIC19.79■□□□□ 0.76
RNF25Q96BH1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF25Q96BH1 CD99P1-205ENST00000527459 561 ntBASIC19.79■□□□□ 0.76
RNF25Q96BH1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF25Q96BH1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF25Q96BH1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF25Q96BH1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms